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Table 1 Genes associated with GA/AMD

From: C1q and the classical complement cascade in geographic atrophy secondary to age-related macular degeneration

Gene

Protein

Activity

Impact of mutation/polymorphism on protein product function

Mutation impact on complement activity

GA risk

CFH

Factor H (FH)

Cofactor for FI-mediated cleavage of C3b; Competes C1q binding; Competes FHR1

Decrease surface binding of FH decreases FI cleavage; allows C1q binding

Increase

Increase OR = 2.7–7.4

CFHR1/3

FHR1 and / or FHR3

Stabilizers C3b; enhances C1q binding; Competes FH

Gentic deletion allows more FH binding, greater FI cleavage of C3b, less C1q binding

Decrease

Decrease OR = 0.35

CFI

Factor I (FI)

Cleaves C3b to inhibit cascade activity and to produce Ic3b for opsonization/phagocytosis

Reduced FI levels / activity

Increase

Increase OR up to 22

C2

C2

Drives classical / lectin activation of C3

Uncharacterized

Increase

Decrease OR = 0.47–0.49

CFB

Factor B (FB)

Drives alternative / AP amplification via activation of C3

Decrease activity

Decrease

Decrease OR = 0.41–0.54

C3

C3

Activation leads to C3b as opsonin and plateform for AP amplification or C5 cleavage

Resistance to inactivation by FI cleavage

Increase

Increase OR 2.8

C9

C9

Component of membrane attack complex(MAC)

Increased MAC polymerization

Increase

Increase OR 2.2

  1. Reference for Table 1: CFH: 23, 37, 38, 41–44; CFHR1/3: 32, 39, 45–48; FI: 35, 49, 50, 54; C2/CFB: 51, 52, 53, 55-57; C3: 35; C9: 58