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Table 1 Description of qRT-PCR Genes

From: The role of mitochondrial genes on nuclear gene expression in neovascular age related macular degeneration: analysis of nuclear VEGF gene expression after ranibizumab treatment in cytoplasmic hybrid retinal pigment epithelial cell lines correlated with clinical evolution

Symbol

Gene Name

RefSeq Number

Function

HIF1A

hypoxia inducible factor 1 subunit alpha

NM_001530

This gene encodes the α subunit of transcription factor hypoxia-inducible factor-1 (HIF-1), HIF-1 functions as a master regulator of cellular and systemic homeostatic response to hypoxia by activating transcription of many genes, including those involved in energy metabolism, angiogenesis, apoptosis, and other genes whose protein products increase oxygen delivery or facilitate metabolic adaptation to hypoxia

SOD2

superoxide dismutase 2

NM_000636

A member of the iron/manganese superoxide dismutase family, this gene encodes a mitochondrial protein that forms a homotetramer and binds one manganese ion per subunit. This protein binds to the superoxide byproducts of oxidative phosphorylation and converts them to hydrogen peroxide and diatomic oxygen

VEGFA

Vascular endothelial growth factor A

NM_003376

A member of the PDGF/VEGF growth factor family, this gene encodes a heparin-binding protein, which exists as a disulfide-linked homodimer. This growth factor induces proliferation and migration of vascular endothelial cells, and is essential for both physiological and pathological angiogenesis

HPRT1

Hypoxanthine phosphoribosyltransferase 1

NM_000194

Transferase which catalyzes conversion of hypoxanthine to inosine monophosphate and guanine to guanosine monophosphate. Critical to generation of purine nucleotides through the purine salvage pathway. Endogenous control for QPCR